Study plan - Approved
Academic year:
 2021/2022
Study programme:
 BFde - Biophysics - (Single degree study, Ph.D. III. deg., Part-Time form)
Study field:
 13. - Physics
 

Study section
Compulsory courses

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/BFB2/14  Cell biophysics II   5 28sL  S  1  W  Štroffeková, Zahradník, Zahradníková 
ÚFV/MBF2/14  Molecular biophysics II   5 28sL  S  1  W  Jancura, Zahradníková, Gaburjáková 
CJP/AJD1/07  English Language for PhD Students 1   2 2P  PaS  1  W  Petruňová, Kolaříková 
ÚFV/BFT/14  Biophotonics   8 24sL + 26sP  S  1  S  Miškovský, Zahradníková, Cagalinec 
ÚFV/MSIM/14  Molecular simulations   8 30sL + 20sP  S  1  S  Uličný, Májeková 
CJP/AJD2/07  English Language for PhD Students 2   3 2P  PaS  1  S  Petruňová, Kolaříková 
ÚFV/CB/14  Cell biology   7 30sL + 15sP  S  2  W  Miškovský, Naďová, Huntošová, Cagalinec, Zahradníková 

 
 
Compulsory elective courses

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/AEDBF/18  Experimental Data Analysis in Biophysics   5 28sL  S      Žoldák 
ÚFV/ASD/14  Data analysis and statistical approaches to high dimensional data   5 28sL  S    W  Horváth 
ÚFV/KPP/16  Selected chapters from biophysics - protein conformational disorders   3 14sL  S    W  Gažová, Fedunová 
ÚFV/MMB/14  Methods of molecular biology   5 28sL  S    W  Sedlák, Štroffeková, Zahradníková 
ÚFV/NTD/16  Nonequilibrium termodynamics   6 14sL + 14sP  S    W  Pudlák 
ÚFV/PZS/14  Surface enhanced spectroscopy   6 15sL + 20sP  S    W  ÚFV/MOS/14 Miškovský, Fabriciová, Jurašeková 
ÚFV/SAVEK/14  Electronics of Surfaces, Colloids and Biomolecules   3 14sL  S    W  Zahradník 
ÚFV/SAVMB/17  Molecular Biophysics of Cells   3 14sP  S    W  Zahradníková 
ÚFV/SSB/14  Systems and synthetic biology   7 30sL + 20sP  S    W  Uličný 
ÚFV/BFP/16  Biophysics of proteins and supramolecular complexes   5 28sL  S      Gažová 
ÚFV/SAVZSLP/17  Basics of the good laboratory practices   5 15sL + 15sP  S  1  W  Zahradníková 
ÚFV/SAVZVE/17  Ethical standards for scientists   5 28sL  S  1  W  Gaburjáková 
ÚFV/SAVSMB2/17  Special methods of biophysics II   5 15sL + 15sP  S  2  W  Zahradník, Gaburjáková, Cagalinec, Zahradníková 
ÚFV/SAVEMB/14  Excitability and Motility of Cells   3 14sL  S  2  W  Zahradník 
ÚFV/BFSa/14  Biophysical seminary I   1 1P  H  2  W  Štroffeková, Zahradník 
ÚFV/BFSc/14  Biophysical seminar III   1 1P  H  3  W  Štroffeková, Zahradník 
ÚFV/BIOE2/14  Bioenergetics II   6 17sL + 15sP  S    S  Jancura, Fabriciová, Fabián, Musatov 
ÚFV/BTD/14  Biological thermodynamics   6 15sL + 15sP  S    S  Sedlák, Jancura, Fedunová, Tomášková 
ÚFV/CSIM/14  Simulations and optimizations of complex biosystems   7 30sL + 20sP  S    S  Uličný, Brutovský 
ÚFV/EMSP/16  Experimental methods for the study of the proteins   6 14sL + 14sP  S    S  Gažová, Fedunová 
ÚFV/FZL/14  Physiology   7 30sL + 12sP  S    S  Zahradníková, Štroffeková, Zahradník 
ÚFV/MMS/16  Molecular mechanisms of oxidative stress in cells   5 28sL  S    S  Musatov 
ÚFV/PING/14  Protein engineering   5 28sL  S    S  Sedlák, Žoldák 
ÚFV/SAVBVK/17  Analysis of biophysical properties of ion channels   5 15sL + 15P  S    S  Gaburjáková, Zahradníková, Gaburjáková 
ÚFV/ZSOM/16  Image acquisition and processing in microscopy.   3 14sL  S    S  Tomori 
ÚFV/SAVSMB/17  Special methods of biophysics I   5 15sL + 15sP  S  1  S  Zahradník, Gaburjáková, Gaburjáková, Zahradníková 
ÚFV/BFSb/14  Biophysical seminar II   1 1P  H  2  S  Štroffeková, Zahradník 
ÚFV/BFSd/14  Biophysical seminar IV   1 1P  H  3  S  Štroffeková, Zahradník 

 
 
Elective courses

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/SSOL/04  Self-motivated Study on Scientific Literature   2   H    S   
ÚFV/SSNM/17  Self-motivated Study on new Methods   4   H    S   


Block - Pedagogicko-psychologický blok
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
KPPaPZ/PsVU/17  Psychology for University Lecturers   5 28sL  A    S  Janovská 
KPE/PgVU/17  Pedagogy for University Teachers   5 28sL  A    W  Orosová 

 Certifikované interdisciplinárne bloky
 Študent si volí jeden alebo viac certifikovaných interdisciplinárnych blokov na základe aktuálnej ponuky: IB1, IB2, IB3, IB4, IB5, IB6, IB7, IB8, IB9, IB10, IB11,
 IB12.
 Absolvovaním predpísaných predmetov z vybraného certifikovaného interdisciplinárneho bloku získa študent certifikát UPJŠ alebo medzinárodne uznávaný
 certifikát.
 Postup pre zápis predpísaných predmetov zvoleného certifikovaného interdisciplinárneho bloku nájdete na: https://rifiv.ccv.upjs.sk/CIB/ako-si-zapisatpredmety.
 Certifikované interdisciplinárne bloky boli vytvorené v rámci projektu „Rozvoj inovatívnych foriem vzdelávania a podpora interdisciplinarity štúdia na Univerzite
 Pavla Jozefa Šafárika v Košiciach (RIFIV)“. Bližšie informácie nájdete na: https://rifiv.ccv.upjs.sk/CIB
 

Certified study programmes
Abbreviation Name
IB1
 Ethics in Biomedical Sciences For Medical Practice
IB10
 International certificate ECo-C
IB11
 International certificate ECDL
IB12a
 Use, Administration, and Development in the SAP System – Administrator
IB12p
 Use, Administration, and Development in the SAP System – Programmer
IB12u
 Use, Administration, and Development in the SAP System – User
IB13
 Psychological, social, and cultural aspects of health
IB2
 Essentials of Law – Aspects of Private Law
IB3
 Essentials of Law – Aspects of Public Law
IB4
 Project Management
IB5
 Closed-end Economy
IB6
 Conflict and Crisis Situations Resolving in Educational Practice
IB9
 International certificate of TOEFL
ITpP
 IT for practice
Z-E-S
 Foreign Erasmus Internship

 

Research section

Block - Scientific papers published
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/ZKC/04  Journals Registered by Current Contets Database   20   A    S   
ÚFV/DKC/04  Journals registered in the Current Contents Connect database and published in the country of residence   15   A    S   
ÚFV/ZNC/04  Journals not registered in the Current Contents Connect database and published abroad   5   A    S   
ÚFV/DNC/04  Journals not registered in the Current Contents Connect database and published in the country of residence   5   A    S   
ÚFV/RZ/04  Reviewed International or National Proceedings   5   A    S   
ÚFV/NZ/04  Non-reviewed collections of papers and monographs published abroad or in the country of residence   2   A    S   


Block - Active Presentation of Results
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/MK/04  International Conference   6   A    S   
ÚFV/DKZU/04  Home Conference with Foreign Participation   4   A    S   
ÚFV/DK/04  National Conference   2   A    S   
Dek. PF UPJŠ/JSD/14  Spring School for PhD Students !  2 4dL  A    S  Kireš 


Block - Outputs
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/SCI/04  Citation registered in Science Citation Index   20   A    S   
ÚFV/CM/04  Citation in monograph   20   A    S   
ÚFV/CZC/04  Citation in scientific journal published abroad   10   A    S   
ÚFV/CDC/04  Citation in scientific journal published in the country of residence   5   A    S   


Block - Other outputs
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/NEM/04  Implementation of new experimental methodology   15   A  4  S   
ÚFV/IG/04  Acquirement of Internal Grant   10   A  3, 4  S   
ÚFV/SDPR/04  Co-worker of project supported by national grant schemes   2   A    S   
ÚFV/SMPR/04  Co-worker of project supported by international grant schemes   15   A    S   
ÚFV/VYS/04  Presentation in Seminar   2   A    S   
ÚFV/PVS/04  Author's patents, discoveries, software   2   A    S   


Other activities

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/ZSP/04  Study Stay Abroad   2   A  3, 4  S   
ÚFV/PPC/04  Teaching activities   1   A    W   
ÚFV/PPC/04  Teaching activities   1   A    S   
ÚFV/VBP/04  Supervisor/consultant of bacelor thesis   6   A  3, 4  S   
ÚFV/VPBP/04  Elaboration of reviewer report   2   A    S   
ÚFV/VPSV/04  Supervision of Student's Scientific Activity   6   A  3, 4  S   
ÚFV/POVK/04  Work in Organizing Committee of Conference   2   A    S   


State exams
Compulsory courses

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/DZS/14  Dissertation examination   20   SS       
ÚFV/ODZP/14  Defence of Doctoral Thesis   30   OB       
ÚFV/PDS/18  Writing Dissertation Work       OB       

 
 
Compulsory elective courses
 
 

Such a symbol can occur after the teaching range:
d - Days in a semester
h - Hours in a week
s - Hours in a semester
t - Weeks in a semester
When none of these symbols are given, expected range of teaching is "hours in a week"
Other signs can occur next to the courses of the study programmes
! - course will not be implemented in the given academic year
+ - course will not be implemented, perhaps the next academic year
- - course is implemented for the last time

* - course has more prerequisites

Explanatory notes:

Range: L - Lecture, P - Practice
Semester: W - Winter, S - Summer
End: S - Examination, H - Evaluation, Z - Credit Exam, A - Passing, PaS - Continuous assessment with examination, P - Continuous assessment / Practice