Study plan - Approved
Academic year:
 2024/2025
Study programme:
 BFde - Biophysics - (Single degree study, Ph.D. III. deg., Part-Time form)
Study field:
 13. - Physics
 

Study section
Compulsory courses

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/BFB2/14  Cell biophysics II   5 28sL  S  1  W  Štroffeková, Zahradníková, Cagalinec 
ÚFV/MBF2/14  Molecular biophysics II   5 28sL  S  1  W  Jancura, Zahradníková, Gaburjáková, Cagalinec 
CJP/AJD1/07  English Language for PhD Students 1   2 2P  PaS  1  W  Kolaříková 
ÚFV/BFT/14  Biophotonics   8 24sL + 26sP  S  1  S  Miškovský, Zahradníková, Cagalinec, Bánó 
ÚFV/MSIM/14  Molecular simulations   8 30sL + 20sP  S  1  S  Uličný, Májeková 
CJP/AJD2/07  English Language for PhD Students 2   3 2P  PaS  1  S  Kolaříková, Kupková 
ÚFV/CB/14  Cell biology   7 30sL + 15sP  S  2  W  Miškovský, Naďová, Huntošová, Cagalinec, Zahradníková 

 
 
Compulsory elective courses

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/FOT2/22  Photonics II   5 28sL  S    W  Bánó 
ÚFV/AEDBF/18  Experimental Data Analysis in Biophysics   5 28sL  S    W  Žoldák 
ÚFV/KPP/16  Selected chapters from biophysics - protein conformational disorders   3 14sL  S    W  Gažová, Fedunová 
ÚFV/MMB/14  Methods of molecular biology   5 28sL  S    W  Štroffeková, Sedlák, Zahradníková 
ÚFV/PZS/14  Surface enhanced spectroscopy   6 15sL + 20sP  S    W  ÚFV/MOS/14 Miškovský, Jurašeková 
ÚFV/MBFB/22  Molecular biophysics of cells   5 15sL + 15sP  S    W  Zahradníková, Zahradníková, Cagalinec 
ÚFV/SSB/14  Systems and synthetic biology   7 30sL + 20sP  S    W  Uličný 
ÚFV/BFP/16  Biophysics of proteins and supramolecular complexes   5 28sL  S    W  Gažová 
ÚFV/SAVZSLP/17  Basics of the good laboratory practices   5 15sL + 15sP  S  1  W  Zahradníková 
ÚFV/SAVZVE/17  Ethical standards for scientists   5 28sL  S  1  W  Gaburjáková 
ÚFV/SAVSMB2/17  Special methods of biophysics II   5 15sL + 15sP  S  2  W  Cagalinec, Zahradníková, Zahradníková 
ÚFV/BFSa/14  Biophysical seminary I   1 1P  H  2  W  Štroffeková, Cagalinec 
ÚFV/BFSc/14  Biophysical seminar III   1 1P  H  3  W  Štroffeková, Cagalinec 
ÚFV/SAVZLT/22  Basics of laboratory technics   3 20sL  H    W  Zahradníková 
ÚFV/BIOE2/14  Bioenergetics II   6 17sL + 15sP  S    S  Jancura, Fabián, Cagalinec, Sumbalová 
ÚFV/BTD/14  Biological thermodynamics   6 15sL + 15sP  S    S  Sedlák, Jancura 
ÚFV/CSIM/14  Simulations and optimizations of complex biosystems   7 30sL + 20sP  S    S  Uličný, Brutovský 
ÚFV/EMSP/16  Experimental methods for the study of the proteins   6 14sL + 14sP  S    S  Gažová, Fedunová 
ÚFV/MMS/16  Molecular mechanisms of oxidative stress in cells   5 28sL  S    S  Šipošová, Musatov 
ÚFV/PING/14  Protein engineering   5 28sL  S    S  Ambro, Tomková 
ÚFV/ZSOM/16  Image acquisition and processing in microscopy.   3 14sL  S    S  Tomori 
ÚFV/SAVSMB/17  Special methods of biophysics I   5 15sL + 15sP  S  1  S  Gaburjáková, Gaburjáková, Zahradníková 
ÚFV/BFSb/14  Biophysical seminar II   1 1P  H  2  S  Štroffeková, Cagalinec 
ÚFV/BFSd/14  Biophysical seminar IV   1 1P  H  3  S  Štroffeková, Cagalinec 
ÚFV/PK2/24  Protein crystallography   4 14sL + 28sP  S  1, 2  S  Nemergut 

 
 
Elective courses

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/SSOL/04  Self-motivated Study on Scientific Literature   2   H    S   
ÚFV/SSNM/17  Self-motivated Study on new Methods   4   H    S   


Block - Pedagogicko-psychologický blok
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
KPE/PgVU/17  Pedagogy for University Teachers   5 28sL  A    W  Orosová 
KPPaPZ/PsVU/17  Psychology for University Lecturers   5 28sL  A    S  Janovská 

 Certifikované interdisciplinárne bloky
 Študent si volí jeden alebo viac certifikovaných interdisciplinárnych blokov na základe aktuálnej ponuky: IB1, IB2, IB3, IB4, IB5, IB6, IB7, IB8, IB9, IB10, IB11,
 IB12.
 Absolvovaním predpísaných predmetov z vybraného certifikovaného interdisciplinárneho bloku získa študent certifikát UPJŠ alebo medzinárodne uznávaný
 certifikát.
 Postup pre zápis predpísaných predmetov zvoleného certifikovaného interdisciplinárneho bloku nájdete na: https://rifiv.ccv.upjs.sk/CIB/ako-si-zapisatpredmety.
 Certifikované interdisciplinárne bloky boli vytvorené v rámci projektu „Rozvoj inovatívnych foriem vzdelávania a podpora interdisciplinarity štúdia na Univerzite
 Pavla Jozefa Šafárika v Košiciach (RIFIV)“. Bližšie informácie nájdete na: https://rifiv.ccv.upjs.sk/CIB
 

Certified study programmes
Abbreviation Name
IB1
 Ethics in Biomedical Sciences For Medical Practice
IB12a
 Use, Administration, and Development in the SAP System – Administrator
IB12p
 Use, Administration, and Development in the SAP System – Programmer
IB12u
 Use, Administration, and Development in the SAP System – User
IB9
 International certificate of TOEFL
ICIK2
 Statistics for the practise
ĽPZ
 Ľudské práva pre každého
PM
 Psychomotorika
SFS
 Skills for Success – from University to Workplace
Z-E-S
 Foreign Erasmus Internship

 

Research section

Block - Scientific papers published
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/DC/22  Local journal   6   A    S   
ÚFV/MONA/22  Monograph in a renowned publishing house   40   A    S   
ÚFV/MONB/22  Monograph   20   A    S   
ÚFV/NRZ/22  Non-Reviewed International or National Proceedings   2   A    S   
ÚFV/Q11A/22  Q1 journal as first or corresponding author   40   A    S   
ÚFV/Q1SA/22  Q1 journal as co-author   30   A    S   
ÚFV/Q21A/22  Q2 journal as first or corresponding author   30   A    S   
ÚFV/Q2SA/22  Q2 journal as co-author   20   A    S   
ÚFV/Q31A/22  Q3 journal as first or corresponding author   25   A    S   
ÚFV/Q3SA/22  Q3 journal as co-author   15   A    S   
ÚFV/Q41A/22  Q4 journal as first or corresponding author   20   A    S   
ÚFV/Q4SA/22  Q4 journal as co-author   10   A    S   
ÚFV/RZ/22  Reviewed International or National Proceedings   5   A    S   
ÚFV/ZC/22  International Journal   8   A    S   
ÚFV/VPZ/22  Scientific work after sending to the editorial office   5   A    S   


Block - Active Presentation of Results
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/DK/04  National Conference   2   A    S   
Dek. PF UPJŠ/JSD/14  Spring School for PhD Students   2 4dL  A    S  Kireš 
ÚFV/DKZU/22  Home Conference with Foreign Participation   5   A    S   
ÚFV/MKZ/22  International abroad conference   10   A    S   


Block - Other outputs
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/NEM/04  Implementation of new experimental methodology   15   A  4  S   
ÚFV/PVS/04  Author's patents, discoveries, software   2   A    S   
ÚFV/SIG/22  Co-worker of project supported by internal grant schemes (VVGS)   3   A    S   
ÚFV/SPAV/22  Co-investigator of the applied research project   5   A    S   
ÚFV/VYS/22  Presentation in Seminar   5   A    S   
ÚFV/ZRIG/22  Principal investigator of an internal grant (VVGS)   10   A    S   
ÚFV/SMPR/04  Co-worker of project supported by international grant schemes   15   A    S   
ÚFV/SDPR/22  Co-worker of project supported by national grant schemes   10   A    S   
ÚFV/SDPR/22  Co-worker of project supported by national grant schemes   10   A    S   


Other activities

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/KZP/22  Thesis consultant   4   A    S   
ÚFV/POP/22  Popularisation of science   5   A    S   
ÚFV/POVK/22  Work in Organizing Committee of Conference   3   A    S   
ÚFV/PPC1/22  Teaching activities 1h/s   2   A       
ÚFV/PPC2/22  Teaching activities 2h/s   4   A       
ÚFV/PPC3/22  Teaching activities 3h/s   6   A       
ÚFV/PPC4/22  Teaching activities 4h/s   8   A       
ÚFV/VPSV/22  Supervision of Student's Scientific Activity   8   A    S   
ÚFV/VPZP/22  Elaboration of reviewer report   3   A    S   
ÚFV/VZP/22  Supervisor/consultant of fianl thesis   8   A    S   
ÚFV/ZSP1/22  International Study Stay less than 30 Days   5   A    S   
ÚFV/ZSP2/22  International Study Stay more than 30 Days   10   A    S   
ÚFV/COK/22  Certified training course   4   A    S   


State exams
Compulsory courses

Block - I
Abbreviation Name Current Credit Range End Year Sem. Prerequisites Teacher
ÚFV/ODZP/14  Defence of Doctoral Thesis   30   OB       
ÚFV/PDS/22  Writing Dissertation Work   20   SS       

 
 
Compulsory elective courses
 
 

Such a symbol can occur after the teaching range:
d - Days in a semester
h - Hours in a week
r - Hours in a year
s - Hours in a semester
t - Weeks in a semester
When none of these symbols are given, expected range of teaching is "hours in a week"
Other signs can occur next to the courses of the study programmes
! - course will not be implemented in the given academic year
+ - course will not be implemented, perhaps the next academic year
- - course is implemented for the last time

* - course has more prerequisites

Explanatory notes:

Range: L - Lecture, P - Practice
Semester: W - Winter, S - Summer
End: S - Examination, H - Evaluation, Z - Credit Exam, A - Passing, PaS - Continuous assessment with examination, P - Continuous assessment / Practice